Patent Reform: Issues in the Biomedical and Software Industries







Prepared for Members and Committees of Congress



Congress has shown interest in reform of the existing patent system. This attention to patent
policy reflects a recognition of the increasing importance of intellectual property to U.S.
innovation. Patent ownership is perceived as an incentive to the technological advancement that
leads to economic growth. As such, the number of patent applications and grants has grown
significantly, as have the type and breadth of inventions that can be patented.
Along with the expansion in the number and range of patents, there are growing concerns over
whether the current system is working efficiently and effectively. Several recent studies
recommend patent reform and several bills have been introduced in recent Congresses that would
make significant alterations in current patent law. Other experts maintain that major alterations in
existing law are unnecessary and that, while not perfect, the patent process can, and is, adapting
to technological progress.
At the present time, the patent laws provide a system under which all inventions are subject to the
same requirements of patentability regardless of the technical field in which they arose. However,
inventors and innovative companies in different industries tend not to hold identical views
concerning the importance of patents, reflecting varying experiences with the patent system.
Innovators in biomedical industries tend to see patent protection as a critically important way to
prohibit competitors from appropriating the results of a company’s research and development
efforts. Typically only a few, often one or two, patents cover a particular drug. In contrast, the
nature of software development is such that inventions often are cumulative and new products
generally embody numerous patentable inventions. As a result, distinct industries may react
differently to patent reform proposals under consideration by Congress.
This report will be updated if events warrant such action.






Introduc tion ..................................................................................................................................... 1
Patents and Innovation....................................................................................................................1
Role of Patents in Biomedical R&D...............................................................................................4
Role of Patents in the Software Industry.........................................................................................7
Concluding Observations..............................................................................................................10
Author Contact Information...........................................................................................................11






Congress has shown interest in reform of the existing patent system. This attention to patent
policy reflects a recognition of the increasing importance of intellectual property to U.S.
innovation. Patent ownership is perceived as an incentive to the technological advancement that
leads to economic growth. As such, the number of patent applications and grants have grown
significantly as have the type and breath of inventions that can be patented. In 1980, 104,329
utility patent applications were received at the U.S. Patent and Trademark Office (USPTO); by

2007, this number had more than quadrupled to 484,955 applications. During the same time 1


period, the number of U.S. utility patents granted grew from 61,819 to 182,901.
Along with the expansion in the number and range of patents, there are growing concerns over
whether the current system is working efficiently and effectively. Several recent studies 2
(including those by the National Academy of Sciences and the Federal Trade Commission)
recommend patent reform. In response, a number of bills were introduced in past Congresses that 3
would make significant alterations in current patent law. Other experts maintain that major
alterations in existing law are unnecessary and that, while not perfect, the patent process can, and
is, adapting to technological progress.
The discussion of patent reform has led to the emergence of several, often opposing, points of
view. While the patent laws provide a system under which all inventions are treated the same
regardless of the technical field, the varying experiences of companies in different industries
often give rise to differing views concerning the importance and role of patents. Innovators in
biomedical industries tend to see patent protection as critically important as a way to prohibit
competitors from appropriating the results of a company’s research and development efforts.
Typically only a few, often one or two, patents cover a particular drug. In contrast, the nature of
software development is such that inventions often are cumulative and new products generally
embody numerous patentable inventions. Acknowledging these differences, this report explores
the relationships between patents and innovation and looks at the role of intellectual property in
the biomedical and software industries, two sectors where U.S. investment in research and
development (R&D) has led to market leadership, a strong export position, and contributed to the
Nation’s economic growth.

Patent law is based upon the Patent Act of 1952, codified in Title 35 of the United States Code.
According to the statute, one who “invents or discovers any new and useful process, machine,
manufacture, or any composition of matter, or any new and useful improvement thereof, may

1 U.S. Patent and Trademark Office, U.S. Patent Statistics, Calendar Years 1963-2007, available at
http://www.uspto.gov/web/offices/ac/ido/oeip/taf/us_stat.pdf.
2 National Research Council, National Academy of Sciences, A Patent System for the 21st Century, (Washington,
National Academies Press, 2004) and Federal Trade Commission, To Promote Innovation: The Proper Balance of
Competition and Patent Law and Policy, October 2003, available at http://www.ftc.gov.
3 The specific legislative changes contained in several of the bills introduced in the 110th Congress are discussed in
CRS Report RL33996, Patent Reform in the 110th Congress: Innovation Issues, by John R. Thomas and Wendy H.
Schacht.





obtain a patent therefore, subject to the conditions and requirements of this title.”4 Patents are
issued by the United States Patent and Trademark Office (USPTO), generally for a term of 20
years from the date of filing. The patent grants its owner the right to exclude others from making,
using, selling, offering to sell, or importing into the United States the patented invention. To be
afforded patent rights, an invention must be judged to consist of patentable subject matter, possess
utility, and be novel and nonobvious. The application must fully disclose and distinctly claim the
invention for which protection is sought.
The grant of a patent does not necessarily provide the owner with an affirmative right to market
the patented invention. For example, pharmaceutical products are also subject to marketing 5
approval by the Food and Drug Administration (FDA). Federal laws typically require that
pharmaceutical manufacturers demonstrate that their products are safe and effective in order to
bring these drugs to the marketplace. USPTO issuance of a patent and FDA marketing consent are 6
distinct events that depend upon different criteria.
Patent ownership is perceived to be an incentive to innovation, the basis for the technological
advancement that contributes to economic growth. Patent title provides the recipient with a
limited-time monopoly over the use of his discovery in exchange for the public dissemination of
information contained in the patent application. Award of a patent is intended to stimulate the
investment necessary to develop an idea and bring it to the marketplace embodied in a product or
process, although it does not guarantee that the patent will generate commercial benefits. The
requirement for publication of the patent is expected to stimulate additional innovation and other
creative means to meet similar and expanded demands in the marketplace.
Innovation produces new knowledge. However, innovation typically is costly and resource
intensive. Studies demonstrate that the rate of return to society as a whole generated by
investments in research and development (R&D) leading to innovation is significantly larger than 7
the benefits that can be captured by the person or organization financing the work. Some
estimate that the social rate of return on R&D spending is over twice that of the rate of return to
the inventor Ideas often are easily imitated as the knowledge associated with an innovation is
dispersed and adapted to other products and processes that, in turn, stimulate growth in the
economy. Patents permit novel concepts or discoveries to become “property” when reduced to
practice and therefore allow for control over their use.
Issuance of a patent furnishes the inventor with a limited-time exclusive right, the benefits of
which are mitigated by other factors, particularly the requirements for information disclosure, the
length of the patent, and the scope of rights conferred. The process of obtaining a patent places
the concept on which it is based in the public domain. In return for a monopoly right to the
application of the knowledge generated, the inventor must publish the ideas covered in the patent.
As a disclosure system, the patent can, and often does, stimulate other firms or individuals to

4 35 U.S.C.§101.
5 For more information see CRS Report RL30756, Patent Law and Its Application to the Pharmaceutical Industry: An
Examination of the Drug Price Competition and Patent Term Restoration Act of 1984 (“The Hatch-Waxman Act”), by
Wendy H. Schacht and John R. Thomas and CRS Report RL32377, The Hatch-Waxman Act: Legislative Changes
Affecting Pharmaceutical Patents, by Wendy H. Schacht and John R. Thomas.
6 For more information see CRS Report RL33288, Proprietary Rights in Pharmaceutical Innovation: Issues at the
Intersection of Patents and Marketing Exclusivities, by John R. Thomas.
7 For a list of relevant research in this area see Council of Economic Advisors. Supporting Research and Development
to Promote Economic Growth: The Federal Government’s Role, October 1995, 6-7.





invent “around” existing patents to provide for parallel technical developments or meet similar
market needs.
Patents may also provide a more socially desirable outcome than its chief legal alternative, trade
secret protection. Trade secrecy guards against the improper appropriation of valuable,
commercially useful information that is the subject of reasonable measures to preserve its 8
secrecy. Taking the steps necessary to maintain secrecy, such as implementing physical security 9
and enforcement, imposes costs that may ultimately be unproductive for society. Also, while the 10
patent law obliges inventors to disclose their inventions to the public, trade secret protection
requires firms to conceal them. The disclosure obligations of the patent system may better serve
the objective of encouraging the diffusion of advanced technological knowledge. Patents may
also prevent unproductive expenditures of time and money associated with R&D that duplicates
other work.
The patent system thus has dual policy goals—providing incentives for inventors to invent and 11
encouraging inventors to disclose technical information. Disclosure requirements are factors in
achieving a balance between current and future innovation through the patent process, as are 12
limitations on scope, novelty mandates, and nonobviousness considerations. Patents give rise to
an environment of competitiveness with multiple sources of innovation, which is viewed by some
experts as the basis for technological progress. This is important because, as Professors Robert
Merges and Richard Nelson found in their studies, in a situation where only “... a few
organizations controlled the development of a technology, technical advance appeared 13
sluggi sh.”
Not everyone agrees that the patent system is a particularly effective means to stimulate
innovation. Some observers believe that the patent system encourages industry concentration and 14
presents a barrier to entry in some markets. They suggest that the patent system often converts
pioneering inventors into technological suppressors, who use their patents to block subsequent 15
improvements and thereby impede technological progress. Others believe that the patent system
too frequently attracts speculators who prefer to acquire and enforce patents rather than engage in 16
socially productive activity such as bringing new products and processes to the marketplace.

8 American Law Institute, Restatement of Unfair Competition Third §39, 1995.
9 David D. Friedman, et al., “Some Economics of Trade Secret Law, 5 Journal of Economic Perspectives, 1991, 61.
10 35 U.S.C. §112 (2000).
11 Robert P. Merges, “Commercial Success and Patent Standards: Economic Perspectives on Innovation,” California
Law Review, July 1988, 876.
12 Kenneth W. Dam,The Economic Underpinnings of Patent Law, Journal of Legal Studies, January, 1994, pp. 266-
267. Scope is determined by the number of claims made in a patent. Claims are the technical descriptions associated
with the invention. In order for an idea to receive a patent, the law requires that it be “... new, useful [novel], and
nonobvious to a person of ordinary skill in the art to which the invention pertains.”
13 Robert P. Merges and Richard R. Nelson, “On the Complex Economics of Patent Scope,” Columbia Law Review,
May 1990, 908.
14 See John R. Thomas, “Collusion and Collective Action in the Patent System: A Proposal for Patent Bounties,
University of Illinois Law Review, 2001, 305.
15 On the Complex Economics of Patent Scope, 839.
16 Elizabeth D. Ferrill,Patent Investment Trusts: Let’s Build a Pit to Catch the Patent Trolls,” 6 North Carlina Journal
of Law and Technology, 2005, 367.





Some experts argue that patents do not work as well in reality as in theory because they do not
confer perfect appropriability. In other words, they allow the inventor to obtain a larger portion of
the returns on his investment but do not permit him to capture all the benefits. Patents can be
circumvented and infringement cannot always be proven. Thus, patents are not the only way, nor
necessarily the most efficient means, for the inventor to protect the benefits generated by his
efforts. A study by Yale University’s Richard Levin and his colleagues concluded that lead time,
learning curve advantages (e.g., familiarity with the science and technology under consideration),
and sales/service activities were typically more important in exploiting appropriability than were
patents. That was true for both products and processes. However, patents were found to be better
at protecting products than processes. The novel ideas associated with a product often can be
determined through reverse engineering—taking the item apart to assess how it was made. That
information then could be used by competitors if not covered by a patent. Because it is more
difficult to identify the procedures related to a process, other means of appropriation are seen as 17
preferable to patents, with the attendant disclosure requirements.

The pharmaceutical industry perceives patents as critical to protecting innovation. Several studies
over the years have demonstrated the important role patents play in the pharmaceutical sector. Of
the 18 major manufacturing industries analyzed by Richard Levin and his colleagues, only drug
companies rated product patents the most effective means of insuring that firms can capture the 18
profits associated with their innovations. Later research by Professor Wesley Cohen and his
colleagues demonstrated that patents were considered the most effective method to protect 19
inventions in the drug industry, particularly when biotechnology is included. These studies
reinforce earlier work by the late Professor Edwin Mansfield that indicated 65% of
pharmaceutical inventions would not have been brought to market without patent protection in 20
contrast to the 8% of innovations made in other industries.
Patents may be particularly important in the pharmaceutical sector because of the relative ease of
replicating the finished product. Imitation costs vary among industries. For example, while it is
expensive, complicated, and time consuming to duplicate an airplane, it is relatively simple to 21
chemically analyze a pill and reproduce it. The degree to which industry perceives patents as
effective has been characterized as “... positively correlated with the increase in duplication costs 22
and time associated with patents.” Early research in this area by Mansfield indicated that, in
certain industries, patents significantly raise the costs incurred by nonpatent holders wishing to
use the idea or invent around the patent—an estimated 40% in the pharmaceutical sector, 30% for
major new chemical products, and 25% for typical chemical goods—and are thus viewed as

17 Richard C. Levin, Alvin K. Klevorick, Richard R. Nelson, and Sidney G. Winter. “Appropriating the Returns for
Industrial Research and Development,Brookings Papers on Economic Activity, 1987, in The Economics of Technical
Change, eds. Edwin Mansfield and Elizabeth Mansfield (Vermont, Edward Elgar Publishing Co., 1993), 254.
18 Ibid., 255 and 257.
19 Wesley M. Cohen, Richard R. Nelson, and John P. Walsh, Protecting Their Intellectual Assets: Appropriability
Conditions and Why U.S. Manufacturing Firms Patent (or Not), NBER Working Paper 7552, Cambridge, National
Bureau of Economic Research, February 2000, available at http://www.nber.org/papers/w7552.
20 Edwin Mansfield, “Patents and Innovation: An Empirical Study, Management Science, February 1986, 173-181.
21 Federic M. Scherer,The Economics of Human Gene Patents, 77 Academic Medicine, December 2002, 1350.
22 Appropriating the Returns for Industrial Research and Development, 269.





significant. However, in other industries, patents have much smaller impact on the costs
associated with imitation (e.g., in the 7%-15% range for electronics), and may be considered less 23
successful in protecting resource investments.
The costs associated with imitating pharmaceuticals “... are extremely low relative to the 24
innovator’s costs for discovering and developing a new compound.” Studies by Dr. Joseph
DiMasi of Tufts University and others indicate that the capitalized cost of bringing a new drug
(defined as a “new molecular entity” rather than a new formulation of an existing pharmaceutical 25
product) to the point of marketing approval is $802 million (2000 dollars). Additional research
done by analysts at the Federal Trade Commission found the costs to be even higher; between 26
$839 million and $868 million (2000 dollars). At the same time, the total capitalized costs 27
appear to be growing at an annual rate of 7.4% above general price inflation.
A large portion of new drug costs (in terms of money and time) are associated with the size and
breath of clinical trials necessary to obtain FDA marketing approval. According to a study
supported by the Federal Reserve Bank of Boston, only 10% of potential drug candidates reach 28
the human trial phase and only a small portion of these actually reach the market. In research
presented at a conference sponsored by the Federal Reserve Bank of Dallas, Duke University’s
Henry Grabowski found that only 1% of drug compounds reach the human trial stage and 22% of 29
those entering clinical trials receive FDA approval. Professor Iain Cockburn notes that “as drug
discovery became more science-intensive, ... it became not just more expensive but also more 30
difficult to manage.” Furthermore, returns to new drug introductions vary widely and the
median new drug does not bring in sufficient profits to cover the costs of bringing the product to 31
the marketplace. According to research by Professors Grabowski, John Vernon, and DiMasi,
only 34% of new drugs (new chemical entities) introduced generated profits that equaled the 32
industry average R&D cost.

23 Edwin Mansfield, Mark Schwartz, and Samuel Wagner, “Imitation Costs and Patents: An Empirical Study, The
Economic Journal, December 1981, in The Economics of Technical Change, 270.
24 Henry Grabowski, “Patents and New Product Development in the Pharmaceutical and Biotechnology Industries,
Duke University Economics Working Paper, July 2002, available at http://www.econ.duke.edu/Papers/Other/
Grabowski/Patents.pdf, 4.
25 Joseph A. DiMasi, Ronald W. Hansen, and Henry G. Grabowski. The Price of Innovation: New Estimates of Drug
Development Costs,” 22 Journal of Health Economics, 2003. Capitalized cost includes the “time cost” associated with
an investment and the cost of testing drug products that fail.
26 Christopher P. Adams and Van V. Brantner, Estimating the Costs of New Drug Development: Is it Really $802m?,
Federal Trade Commission, December 2004, available at http://media.romanvenable.net/images/drugCost.pdf.
27 The Price of Innovation: New Estimates of Drug Development Costs, 180.
28 Carrie Conway, “The Pros and Cons of Pharmaceutical Patents, Regional Review, Federal Reserve Bank of Boston,
March 2003, available at http://www.findarticles.com.
29 Henry G. Grabowski, “Patents, Innovation, and Access to New Pharmaceuticals,Journal of International Economic
Law, 2002, 851.
30 Iain Cockburn, “The Changing Structure of the Pharmaceutical Industry, Health Affairs, January/February 2004, 15.
31 Henry G. Grabowski, “Patents and New Product Development in the Pharmaceutical and Biotechnology Industries,
Science and Cents: Exploring the Economics of Biotechnology, Proceedings of a 2002 Conference, Federal Reserve
Bank of Dallas, pp. 95-96 available at http://www.dallasfed.org/research/pubs/science/grabowski.pdf and Henry
Grabowski, John Vernon, and Joseph A. DiMasi, “Returns on Research and Development for 1990s New Drug
Introductions,” 20 Pharmacoeconomics, 2002.
32 Returns on Research and Development for 1990s New Drug Introductions, 23.





The significant costs of pharmaceutical R&D, coupled with the uncertainty of the clinical trial
process, lend consequence to patents in this area because “... the disparity between the
investments of innovators and those of imitators is particularly large in pharmaceuticals—almost 33
as large as when software pirates simply copy the diskettes of an innovator.” While the
capitalized cost of developing a new drug to the point of market approval is over $800 million, it
takes only between $1 million and $2 million to obtain approval for a generic version of the 34
pharmaceutical. This difference is a result of the costs associated with clinical trials needed to
demonstrate the safety and efficacy of a new drug, data that could be utilized by generic 35
companies if not protected by a patent. A generic company does not have to fund these studies
to get FDA marketing approval; under the provisions of the Hatch-Waxman Act generic firms 36
only have to prove that their product is “bioequivalent” to the innovator drug.
While patents are designed to spur innovation, some experts maintain that certain patents, 37
particularly those on research tools in biotechnology, hinder the innovation process. Professors
Rebecca Eisenberg and Richard Nelson argue that ownership of research tools may “... impose 38
significant transaction costs” that result in delayed innovation and possible future litigation. It
also can stand in the way of research by others:
Broad claims on early discoveries that are fundamental to emerging fields of knowledge are
particularly worrisome in light of the great value, demonstrated time and again in history of
science and technology, of having many independent minds at work trying to advance a
field. Public science has flourished by permitting scientists to challenge and build upon the 39
work of rivals.
Eisenberg and her colleague at the University of Michigan Law School, Michael Heller, contend
that in the future scientists might need to obtain numerous patent licenses in order to undertake 40
basic research. Similar concerns were expressed by Harold Varmus, President of Memorial
Sloan-Kettering and formerly the Director of the National Institutes of Health. In July 2000
prepared testimony, he spoke to being “ ... troubled by widespread tendencies to seek protection
of intellectual property increasingly early in the process that ultimately leads to products of
obvious commercial value, because such practices can have detrimental effects on science and its 41
delivery of health benefits.”

33 The Economics of Human Gene Patents, 1352.
34 Patents, Innovation, and Access to New Pharmaceuticals, 852.
35 The Economics of Human Gene Patents, 1352.
36 For more information see CRS Report RL30756, Patent Law and Its Application to the Pharmaceutical Industry: An
Examination of the Drug Price Competition and Patent Term Restoration Act of 1984 (“The Hatch-Waxman Act”), by
Wendy H. Schacht and John R. Thomas.
37 A biotechnology research tool is a cell line, reagent, or antibody used in research.
38 Rebecca S. Eisenberg and Richard R. Nelson,Public vs. Proprietary Science: A Fruitful Tension?, Daedalus,
spring 2002.
39 Ibid.
40 Michael A. Heller and Rebecca S. Eisenberg, “Can Patents Deter Innovation? The Anticommons in Biomedical
Research,” 280 Science, 1998, 698-701.
41 U.S. Congress, House Committee on the Judiciary, Subcommittee on Courts and Intellectual Property, Hearings on
Gene Patents and Other Genomic Inventions, July 13, 2000, available at http://www.house.gov/judiciary/
seve0713.htm.





However, other experts dispute this assertion. A study by Professors John Walsh, Ashish Arora,
and Wesley Cohen found that although there are now more patents associated with biomedical
research, and on more fundamental work, there is little evidence that work has been curtailed due 42
to intellectual property issues associated with research tools. Scientists are able to continue their
research by “... licensing, inventing around patents, going offshore, the development and use of
public databases and research tools, court challenges, and simply using the technology without a
license (i.e., infringement).” According to the authors of the report, private sector owners of
patents permitted such infringement in academia (with the exception of those associated with
diagnostic tests in clinical trials) “... partly because it can increase the value of the patented
t e c h no l o gy. ”
Later research by Cohen, Walsh, and Charlene Cho found that “ ... only 1% of academic
researchers (i.e., those in universities, non-profits and government labs) report having to delay a
project, and none abandoned a project due to others’ patents, suggesting that neither anti-43
commons nor restrictions on access were seriously limiting academic research.” In addition to
finding that patents did not interfere with ongoing R&D, the authors found that patents had
“significantly less” impact on what projects were actually pursued than lack of funding, time
constraints, or scientific competition. However, “respondents doing research on drugs and
therapies were ... somewhat more likely to report that unreasonable terms demanded for research 44
inputs were an important reason for them not to pursue a project.”

Over the past 25 years, there has been a demonstrable and sustained increase in the number of
software patents granted in the United States. Research by James Bessen and Robert Hunt for the
Federal Reserve Bank of Philadelphia noted that the 1,000 software patents issued annually in the 45
early 1980s had increased to an annual total of 5,000 by 1990. Today over 20,000 software
patents are granted each year. While software patents comprised approximately 2% of all patents
awarded in the early 1980s, they now account for approximately 15% of the total number of U.S. 46
patent issued each year.
Experts differ as to their assessment of the role of patents in promoting innovation in the
computer software sector. This discussion centers around the issue of whether the increase in the
number of patents is a result of inventive behavior generated by intellectual property protection or
a result of changes in law during the 1980s and 1990s that made patents on software easier to
obtain. Some experts argue that patent protection is not a significant factor in the development of

42 John P. Walsh, Ashish Arora, Wesley M. Cohen,Working Through the Patent Problem, Science, February 14,
2003, 1021.
43 Wesley M. Cohen and John P. Walsh, Real Impediments to Academic Biomedical Research, NBER, May 15, 2007,
12 and forthcoming in Innovation Policy and Economics, Vol. 7, available at http://nber15.nber.org/books_in_progress/
innovation8/cohen-walsh6-19-07.pdf. See also John P. Walsh, Charlene Cho, and Welsely Cohen, “View from the
Bench: Patents and Material Transfers, Science, 23 September 2005, 2002-2003.
44 Ibid., 13.
45 There is no official USPTO category forsoftware patents; Bessen and Hunt use their own definition.
46 James Bessen and Robert M. Hunt, An Empirical Look at Software Patents, Working Paper No. 03-17/R, Federal
Reserve Bank of Philadelphia, March 2004, p. 3, available at http://www.phil.frb.org and Robert Hunt and James
Bessen, “The Software Patent Experiment,” Q3 2004 Business Review, 24, available at http://www.phil.frb.org.





computer software programs. Other analysts maintain that they play an important role in
generating new technologies, particularly for small firms in the marketplace.
The nature of software development is such that inventions often are cumulative and new
products generally embody numerous patentable inventions. This has led to what has been
described by some observers as a
... poor match between patents and products in the [software] industry: it is difficult to patent
an entire product in the software industry because any particular product is likely to include 47
dozens if not hundreds of separate technological ideas.
This situation may be augmented by the multiplicity of patents often associated with a finished
computer product that utilizes the software. It is not uncommon for thousands of different patents
(relating to hardware and software) to be embodied in one single computer. In addition,
ownership of these patents may well be fractured among hundreds or thousands of different
individuals and firms.
Studies by Bessen and Hunt explored the characteristics of software patents and determined that
most are not owned by software companies but by large manufacturing companies. They found
that
Firms in just three manufacturing industries (machinery, electronics, and instruments) alone
accounted for 66 percent of software patents [yet] ... Firms outside the manufacturing sector
employed 90 percent of computer programmers, but together they accounted for only 25 48
percent of software patents.
This data leads the authors to the conclusion that patents may not be closely tied to the
development of new software technologies. Ownership of such patents is concentrated in sectors 49
that have large patent portfolios and use them for strategic purposes. Instead, they believe that
companies are utilizing patents as a means to protect or leverage their investments rather than to 50
generate more innovation through R&D spending.
In industries where innovation is sequential and complementary, as with software and computers, 51
some experts argue that strong patents interfere with the innovation process. Inventions in these
sectors typically are built upon earlier technologies and are integrated into existing systems.
Commentators pose that patents inhibit or prevent enhancements to existing products because the
patent owner may not have the interest or capability necessary to generate improvements at the
same time that other firms cannot advance the technology without infringing on the original
patent.
Not everyone agrees with this assessment. Professor Robert Merges maintains that patents have
not hindered innovation in the software industry and that the significant ownership of title to

47 Ronald J. Mann,Do Patents Facilitate Financing in the Software Industry?,” Texas Law Review, March 2005, 979.
48 The Software Patent Experiment, 26.
49 An Empirical Look at Software Patents, 4.
50 The Software Patent Experiment, 26.
51 James Bessen and Eric Maskin, “Sequential Innovation, Patents, and Imitation,” Massachusetts Institute of
Technology Working Paper, Department of Economics, January 2000, p. 2 available at
http://www.researchoninnovation.org/patent.pdf.





inventions by large companies in this sector has not resulted in the demise of small firms 52
developing new technologies. Analysis of software companies by Professor Ronald Mann
indicates the importance of software patents to small companies, particularly later-stage start-ups
firms. He notes that the software industry is comprised primarily of small businesses and “the 53
data suggests a different picture, one in which software R&D is impressively robust.” Mann’s
research indicates that small firms spend proportionally more on software R&D than large
companies. Research and development spending by software firms “... tends to be relatively
stable over time as a percentage of sales. Indeed, company size seems to be more important in 54
explaining variations in R&D spending within the industry.”
Mann’s research also indicates that the importance of software patents is dependent on where the
firm is in its development process. Patents play a more significant role in later-stage start-up 55
companies when firms can generate revenues through licensing. At that point, “... patents are
useful as “barter” in cross-licensing agreements that the firm enters if it reaches a sufficiently 56
mature stage to be a significant player in the industry.” Patents may allow a firm to differentiate 57
its areas of expertise and innovative activity.
Patents enable a company to transform ideas into a tangible form of property that can provide
value. This can be useful in negotiations for the acquisition of the firm. While intellectual
property is important to some investors but not to others, it is considered a significant factor when 58
a company is involved in acquisition negotiations or in an IPO. It can prevent large companies
from appropriating a small firm’s technology. Bradford Smith and Susan Mann, writing in the
University of Chicago Law Review, concur with the argument that patents are beneficial for
small, software firms. They maintain that patents prevent larger companies from utilizing the
technologies developed by small businesses while allowing these companies to attract venture 59
capital.
The multiplicity of patents involved in computer-related products has resulted in the extensive
use of cross licensing in these industries such that one commentator argues: “licensing of 60
software patents has become an industry unto itself.” Instead of promoting innovation, some
experts maintain that the ownership of intellectual property has become an obstacle to the
development and application of new ideas. The expansion in the number of patents associated
with software is a consequence of the changes in patent law that make these patents easier to
obtain, rather than an indication of increased innovative activity. There are indications, according 61
to Bessen and Hunt, that patents are being substituted for increases in R&D. The substitution

52 Robert P. Merges, “The Uninvited Guest: Patents on Wall Street,” Federal Reserve Bank of Atlanta Economic
Review, 4th Quarter 2003, 9.
53 Do Patents Facilitate Financing in the Software Industry?, 1002.
54 Ibid., 1003.
55 Ibid., 985.
56 Ibid., 990.
57 Ibid., 985.
58 Ibid., 978.
59 Bradford L. Smith and Susan O. Mann,Innovation and Intellectual Property Protection in the Software Industry: An
Emerging Role for Patents?,” University of Chicago Law Review, winter 2004, 206.
60 Mark H. Webbink, “A New Paradigm for Intellectual Property Rights in Software,” Duke Law and Technology
Review, 2005, 12 and 16.
61 The Software Patent Experiment, 28-29.





occurs in industries that patent strategically but not in other sectors.62 The propensity to patent
software appears to be related to the utilization of the software by companies rather than to the 63
R&D resources expended in developing the product. This is of interest because a rationale
behind the patent system is that it provides incentives for the additional investments necessary to
bring a product to the marketplace.
Concerns have been expressed in the academic community that the propensity to patent and the
extensive use of cross licensing has resulted in a “patent thicket” where ownership of patent title
is used to block others from innovating. According to Bessen and Hunt, “This may have increased 64
the attractiveness of a strategy that emphasizes patent rights over a strategy based on R&D.”
However, other experts maintain that this might not be a true assessment of the situation. In an
article for the Virginia Journal of Law and Technology, David Evans and Anne Layne-Farrar
argue it is not clear that a patent thicket exists. “Other industries with longstanding histories of
patenting could be categorized as having cumulative and sequential R&D, yet they do not display 65
signs of innovation gridlock.” There are additional ways to prevent the use of patents to block
innovation including the use of pro-competitive patent pools and antitrust enforcement.
Others agree that innovation in the software industry is not hindered by a patent thicket. In one
study where actual software companies and investors were surveyed, the analyst found new
companies were not concerned with existing patent portfolios as a barrier to their work as “none
of the startup firms [interviewed] suggested a practice of doing prior art searches before 66
beginning development of their products.” Because the software industry is so diverse, it is “... 67
difficult for any single patent or group of patents to control a major part of the whole industry.”

Innovators in the biomedical and software industries tend to view patents differently and thus
may exhibit divergent positions on the issues surrounding patent reform. Patent protection is
critically important to the pharmaceutical and biotechnology sectors as a way to prohibit
competitors from appropriating the results of a company’s research and development efforts.
However,
... patents are not among the key means used to protect innovations in either the computer or
semiconductor industries. In those two industries, firms rely more heavily on secrecy, lead 68
time and complementary capabilities to protect their inventions.
A difference between the role of patents in the biomedical community and their role in the
computer software sector lie with the dissimilar composition of the respective products. Typically

62 An Empirical Look at Software Patents, 34.
63 The Software Patent Experiment, 27.
64 Ibid., 30.
65 David S. Evans and Anne Layne-Farrar, “Software Patents and Open Source: The Battle Over Intellectual Property
Rights,” Virginia Journal of Law and Technology, Summer 2004, 23.
66 Do Patents Facilitate Financing in the Software Industry?, 1004.
67 Ibid., 1007.
68 Protecting Their Intellectual Assets: Appropriability Conditions and Why U.S. Manufacturing Firms Patent (or Not),
8.





only a few, often one or two, patents cover a particular drug. In contrast, the nature of software
development is such that inventions often are cumulative and new products generally embody
numerous patentable inventions. While few companies other than those that manufacture drugs
need to deal with the relevant pharmaceutical patents,
... computers are ubiquitousand as a result, so is software authorship ... Thus, a patent on a
drug creates potential liability for those companies in the pharmaceutical business, while a
software patent creates potential liability for any company with its own website or software 69
customizations, regardless of its business.
At the present time, the patent laws provide a system under which all inventions are subject to the
same requirements of patentability regardless of the technical field in which they arose. However,
as discussed in this paper, inventors and innovative companies in different industries may not
hold identical views concerning the role of patents and may have had varying experiences with
the patent system. As a result, distinct industries may react differently to any patent reform
proposals under consideration by Congress.
Wendy H. Schacht
Specialist in Science and Technology Policy
wschacht@crs.loc.gov, 7-7066


69 Ben Klemens, The Computer-Shaped Hole in the Patent Reform Act, The Brookings Institution, July 28, 2005.